BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015H06LP1|AL426918
(932 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1683 1716 0.0
>3x_Contig1683
Length = 16378
Score = 1716 bits (864), Expect = 0.0
Identities = 904/916 (98%), Gaps = 2/916 (0%)
Strand = Plus / Minus
Query: 17 gatcggtcccatattcaaagcagggcattgagaaaccggtcagtagtgccggtgttttcg 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6224 gatcggtcccatattcaaagcagggcattgagaaaccggtcagtagtgccggtgttttcg 6165
Query: 77 aagtttcaagctcgagaaatgattacatataattattctgtgaatatatacgtatatgtg 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6164 aagtttcaagctcgagaaatgattacatataattattctgtgaatatatacgtatatgtg 6105
Query: 137 cacattggtgtggggaagaacacagaaattgttaataggaattggttgataggggggaaa 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6104 cacattggtgtggggaagaacacagaaattgttaataggaattggttgataggggggaaa 6045
Query: 197 ccgttccgtcattcatcaatggagttaactcgtcagattcaagtcttctaatgttgtagt 256
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6044 ccgttccgtcattcatcaatggagtgaactcgtcagattcaagtcttctaatgttgtagt 5985
Query: 257 cttccgcgtacaaaacgtagttttggtagaagtagatcaaatcgaacactacagtgcctg 316
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5984 cttccgcgtacaaaacgtagtgttggtagaagtagatcaaatcgaacactacagtgcctg 5925
Query: 317 cgctccccacgataaatggtaatgcattgagtacgaaacctagcttgtcctcatctgtga 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5924 cgctccccacgataaatggtaatgcattgagtacgaaacctagcttgtcctcatctgtga 5865
Query: 377 gataagagcaactggtgaaaatggatagtgtgtatgtkacatttgcaattaacgtactta 436
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5864 gataagagcaactggtgaaaatggatagtgtgtatgtgacatttgcaattaacgtactta 5805
Query: 437 taaagaggaggggtgaaagcccatcagtactcttccttttgtaattcttgatcaattgtg 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5804 taaagaggaggggtgaaagcccatcagtactcttccttttgtaattcttgatcaattgtg 5745
Query: 497 gaattctggcacagaaataggacattgctccgacccaggatgccaattgaccaataaagc 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5744 gaattctggcacagaaataggacattgctccgacccaggatgccaattgaccaataaagc 5685
Query: 557 ttgtatggggtggttcaataggcacaacgggcgacggacggtgcttactaaacggaaaaa 616
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5684 ttatatggggtggttcaataggcaaaacgggcgacggacggtgcttactaaacggaaaaa 5625
Query: 617 ctgtttcggatccagttatggcttgagccatggacacgacaggcatcgggaacccttgaa 676
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5624 ctgtttcgggtccagtaatggcttgagccatggacacgacaggcatcgggaacccttgaa 5565
Query: 677 cagttccaggctgactgacgaagaatgataagatccaccatttgaacccgcgttgcaatt 736
|||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 5564 cagttccaagctgactgacgaagaatgataagatccacca-ttgaacccgcg-tgcaatt 5507
Query: 737 gaatactggggtttgaaccacggcttcgtaccaaacgtgttcgttcttctaaagtagcag 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5506 gaatactggggtttgaaccacggcttcgtaccaaacgtgttcgttcttctaaagtagcag 5447
Query: 797 actcatggcctggagtcgctagctgattccggtgtaaaataccgtagtaatagtattgac 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5446 actcatggcctggagtcgctagctgattccggtgtaaaataccgtagtaatagtattgac 5387
Query: 857 cacatatcaacatgtcattagacaaataataaactgccaaaagaatctggaatgggagtt 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5386 cacatatcaacatgtcattagacaaataataaactgccaaaagaatctggaatgggagtt 5327
Query: 917 gatgagtwagttcagc 932
||||||| ||| ||||
Sbjct: 5326 gatgagtaagtacagc 5311
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5832
Number of Sequences: 1807
Number of extensions: 5832
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)